Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Gm26524-201ENSMUST00000192339 390 ntBASIC16.58■□□□□ 0.24
Polr2jO08740 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.58■□□□□ 0.24
Polr2jO08740 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Polr2jO08740 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.58■□□□□ 0.24
Polr2jO08740 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Polr2jO08740 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Polr2jO08740 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Polr2jO08740 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Polr2jO08740 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Polr2jO08740 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Polr2jO08740 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.57■□□□□ 0.24
Polr2jO08740 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Polr2jO08740 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Polr2jO08740 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Polr2jO08740 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Polr2jO08740 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Polr2jO08740 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Polr2jO08740 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.57■□□□□ 0.24
Polr2jO08740 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Polr2jO08740 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Polr2jO08740 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Polr2jO08740 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Polr2jO08740 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Polr2jO08740 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Polr2jO08740 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.56■□□□□ 0.24
Polr2jO08740 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Polr2jO08740 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Polr2jO08740 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Polr2jO08740 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Polr2jO08740 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Polr2jO08740 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Polr2jO08740 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Polr2jO08740 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.55■□□□□ 0.24
Polr2jO08740 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Polr2jO08740 Gm13148-201ENSMUST00000118892 745 ntBASIC16.55■□□□□ 0.24
Polr2jO08740 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.55■□□□□ 0.24
Polr2jO08740 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.55■□□□□ 0.24
Polr2jO08740 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Rab3c-203ENSMUST00000224180 967 ntBASIC16.55■□□□□ 0.24
Polr2jO08740 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Mtag2-201ENSMUST00000058665 714 ntBASIC16.55■□□□□ 0.24
Polr2jO08740 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.55■□□□□ 0.24
Polr2jO08740 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Polr2jO08740 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Polr2jO08740 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Polr2jO08740 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Polr2jO08740 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Polr2jO08740 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Gm42569-201ENSMUST00000200539 472 ntBASIC16.54■□□□□ 0.24
Polr2jO08740 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.54■□□□□ 0.24
Polr2jO08740 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Polr2jO08740 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Polr2jO08740 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Polr2jO08740 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Polr2jO08740 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Polr2jO08740 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Polr2jO08740 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms