Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfx8D3YU81 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rfx8D3YU81 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx8D3YU81 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx8D3YU81 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx8D3YU81 Gm715-201ENSMUST00000117865 831 ntBASIC18.29■□□□□ 0.52
Rfx8D3YU81 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Rfx8D3YU81 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx8D3YU81 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx8D3YU81 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx8D3YU81 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx8D3YU81 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx8D3YU81 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfx8D3YU81 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.28■□□□□ 0.52
Rfx8D3YU81 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.28■□□□□ 0.52
Rfx8D3YU81 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfx8D3YU81 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx8D3YU81 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx8D3YU81 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx8D3YU81 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Rfx8D3YU81 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx8D3YU81 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx8D3YU81 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rfx8D3YU81 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfx8D3YU81 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfx8D3YU81 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfx8D3YU81 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rfx8D3YU81 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Timm23-208ENSMUST00000226683 750 ntBASIC18.26■□□□□ 0.51
Rfx8D3YU81 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.26■□□□□ 0.51
Rfx8D3YU81 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfx8D3YU81 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.25■□□□□ 0.51
Rfx8D3YU81 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.25■□□□□ 0.51
Rfx8D3YU81 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.25■□□□□ 0.51
Rfx8D3YU81 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.25■□□□□ 0.51
Rfx8D3YU81 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfx8D3YU81 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms