Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.56■□□□□ 0.56
Ptchd4B9EKX1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd4B9EKX1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd4B9EKX1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ptchd4B9EKX1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ptchd4B9EKX1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ptchd4B9EKX1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ptchd4B9EKX1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.55■□□□□ 0.56
Ptchd4B9EKX1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ptchd4B9EKX1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ptchd4B9EKX1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.55■□□□□ 0.56
Ptchd4B9EKX1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ptchd4B9EKX1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ptchd4B9EKX1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ptchd4B9EKX1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ptchd4B9EKX1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ptchd4B9EKX1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ptchd4B9EKX1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Gm11950-201ENSMUST00000121615 838 ntBASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Gm37722-201ENSMUST00000193757 208 ntBASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ptchd4B9EKX1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ptchd4B9EKX1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ptchd4B9EKX1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptchd4B9EKX1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptchd4B9EKX1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptchd4B9EKX1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptchd4B9EKX1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.53■□□□□ 0.56
Ptchd4B9EKX1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptchd4B9EKX1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.53■□□□□ 0.56
Ptchd4B9EKX1 Gm27741-201ENSMUST00000185060 237 ntBASIC18.53■□□□□ 0.56
Ptchd4B9EKX1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ptchd4B9EKX1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Ptchd4B9EKX1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ptchd4B9EKX1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.52■□□□□ 0.55
Ptchd4B9EKX1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptchd4B9EKX1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptchd4B9EKX1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.51■□□□□ 0.55
Ptchd4B9EKX1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptchd4B9EKX1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.51■□□□□ 0.55
Ptchd4B9EKX1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ptchd4B9EKX1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Ptchd4B9EKX1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ptchd4B9EKX1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptchd4B9EKX1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptchd4B9EKX1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptchd4B9EKX1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ptchd4B9EKX1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.51■□□□□ 0.55
Ptchd4B9EKX1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Ptchd4B9EKX1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms