Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav15d-2-dv6d-2A0A0G2JGQ7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10602-201ENSMUST00000098239 609 ntBASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13158-201ENSMUST00000122007 736 ntBASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Haglr-201ENSMUST00000100000 2085 ntBASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms