Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Gm45102-201ENSMUST00000207427 857 ntBASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Gm7860-201ENSMUST00000121190 879 ntBASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trdv2-1A0A0G2JGB9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Gm14117-201ENSMUST00000122417 843 ntBASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trdv2-1A0A0G2JGB9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms