Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gm6139-201ENSMUST00000079261 882 ntBASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9d-4A0A0G2JG37 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gm37563-201ENSMUST00000192580 1513 ntBASIC11.86□□□□□ -0.51
Trav9d-4A0A0G2JG37 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gm45417-201ENSMUST00000209533 758 ntBASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9d-4A0A0G2JG37 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms