Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Flg-201ENSMUST00000050758 1488 ntBASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Mir1199-201ENSMUST00000117015 119 ntBASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-4A0A0G2JG01 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-4A0A0G2JG01 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-4A0A0G2JG01 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms