Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm38205-201ENSMUST00000192243 258 ntBASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav3n-3A0A0G2JEM0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.08□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav3n-3A0A0G2JEM0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gm43060-201ENSMUST00000200621 289 ntBASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gm40848-201ENSMUST00000221998 324 ntBASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav3n-3A0A0G2JEM0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gm13216-201ENSMUST00000117145 591 ntBASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav3n-3A0A0G2JEM0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms