Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Gm10493-201ENSMUST00000097270 612 ntBASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms