Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trav12-3A0A075B648 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Gm43759-201ENSMUST00000196925 1261 ntBASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12-3A0A075B648 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trav12-3A0A075B648 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms