Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm4974-201ENSMUST00000209974 875 ntBASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav6-7-dv9A0A075B639 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm37856-201ENSMUST00000191634 999 ntBASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav6-7-dv9A0A075B639 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm37292-201ENSMUST00000192062 758 ntBASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-7-dv9A0A075B639 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-7-dv9A0A075B639 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-7-dv9A0A075B639 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms