Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6-6A0A075B603 Tgds-204ENSMUST00000228543 1594 ntBASIC12.9□□□□□ -0.35
Trav6-6A0A075B603 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Gm7514-201ENSMUST00000209475 934 ntBASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-6A0A075B603 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Gm6420-201ENSMUST00000193885 723 ntBASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-6A0A075B603 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-6A0A075B603 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Nespas-201ENSMUST00000143738 1083 ntBASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms