Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Col3a1P08121 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Gm24019-201ENSMUST00000178620 107 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Gm26243-201ENSMUST00000179260 107 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Col3a1P08121 Gm26092-201ENSMUST00000179798 97 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Mir669a-1-201ENSMUST00000180238 97 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Gm27315-201ENSMUST00000183977 154 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Gm19777-201ENSMUST00000191940 358 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Gm44376-201ENSMUST00000197570 128 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Gm34783-201ENSMUST00000209159 303 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col3a1P08121 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Gm4057-201ENSMUST00000221407 368 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.97□□□□□ -1.77
Col3a1P08121 AC131085.1-201ENSMUST00000224746 656 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col3a1P08121 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.97□□□□□ -1.77
Col3a1P08121 Gm23296-201ENSMUST00000082555 107 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Gm22979-201ENSMUST00000082609 159 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Gm24859-201ENSMUST00000082729 107 ntBASIC3.97□□□□□ -1.77
Col3a1P08121 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Col3a1P08121 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Col3a1P08121 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
Col3a1P08121 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.77
Col3a1P08121 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col3a1P08121 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Col3a1P08121 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Col3a1P08121 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Col3a1P08121 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col3a1P08121 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col3a1P08121 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Gm11260-201ENSMUST00000121163 942 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Gm12858-201ENSMUST00000121913 208 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Col3a1P08121 Gm14651-201ENSMUST00000147192 442 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Gm23668-201ENSMUST00000157465 111 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Mir5101-201ENSMUST00000175181 83 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.96□□□□□ -1.78
Col3a1P08121 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col3a1P08121 Gm7654-201ENSMUST00000186738 683 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.96□□□□□ -1.78
Col3a1P08121 Gm20162-201ENSMUST00000193629 871 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Gm44404-201ENSMUST00000203979 636 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Gm20997-201ENSMUST00000205148 231 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.96□□□□□ -1.78
Col3a1P08121 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col3a1P08121 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Col3a1P08121 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Col3a1P08121 Gm23378-201ENSMUST00000082942 107 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Col3a1P08121 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.96□□□□□ -1.78
Col3a1P08121 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Col3a1P08121 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Col3a1P08121 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Col3a1P08121 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Col3a1P08121 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Col3a1P08121 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Col3a1P08121 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col3a1P08121 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.95□□□□□ -1.78
Col3a1P08121 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Mir1198-201ENSMUST00000116995 121 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm12568-201ENSMUST00000117362 624 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm12261-201ENSMUST00000117499 645 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm13379-201ENSMUST00000118053 621 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm12889-201ENSMUST00000118684 241 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col3a1P08121 Gm10075-201ENSMUST00000162030 545 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm27317-201ENSMUST00000183533 95 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm29105-201ENSMUST00000187256 450 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm38149-201ENSMUST00000191943 339 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.95□□□□□ -1.78
Col3a1P08121 Gm29950-201ENSMUST00000195273 237 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.95□□□□□ -1.78
Col3a1P08121 Gm8319-201ENSMUST00000205708 641 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm18855-201ENSMUST00000206689 570 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col3a1P08121 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.95□□□□□ -1.78
Col3a1P08121 AC166323.1-201ENSMUST00000217756 367 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm4052-201ENSMUST00000220890 451 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col3a1P08121 Gm25581-201ENSMUST00000083410 164 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.95□□□□□ -1.78
Col3a1P08121 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms