Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC097376.1-201ENST00000602907 997 ntBASIC6.1□□□□□ -1.43
HLA-DQB1P01920 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DQB1P01920 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC6.1□□□□□ -1.43
HLA-DQB1P01920 AC239600.2-201ENST00000619615 1165 ntBASIC6.1□□□□□ -1.43
HLA-DQB1P01920 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
HLA-DQB1P01920 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.1□□□□□ -1.43
HLA-DQB1P01920 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DQB1P01920 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DQB1P01920 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.1□□□□□ -1.43
HLA-DQB1P01920 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.1□□□□□ -1.43
HLA-DQB1P01920 CCAT2-201ENST00000630920 1752 ntBASIC6.1□□□□□ -1.43
HLA-DQB1P01920 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DQB1P01920 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DQB1P01920 TNPO1P2-201ENST00000426249 2665 ntBASIC6.1□□□□□ -1.43
HLA-DQB1P01920 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HLA-DQB1P01920 AL136531.3-201ENST00000624378 3658 ntBASIC6.1□□□□□ -1.43
HLA-DQB1P01920 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 TRIM51FP-201ENST00000526452 1353 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 CTSLP8-201ENST00000413075 967 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AC009413.1-201ENST00000414823 399 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 RPE-205ENST00000429907 925 ntTSL 2 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 FAF2P1-201ENST00000429974 1298 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 EIF3IP1-201ENST00000433048 967 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 HSPA8P3-201ENST00000449300 780 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 TVP23CP1-201ENST00000450317 639 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AC012493.1-201ENST00000453252 760 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AL590648.1-201ENST00000456479 460 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 RN7SL251P-201ENST00000464175 297 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 RN7SL702P-201ENST00000488394 292 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AP005202.1-201ENST00000489915 867 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 EEF1B2P2-201ENST00000519625 676 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 OR4A6P-201ENST00000534364 970 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AC068631.3-201ENST00000538831 225 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 RN7SL376P-201ENST00000578594 264 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AL359704.2-201ENST00000604335 521 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AC026468.1-201ENST00000614981 107 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 AC012254.5-201ENST00000623573 478 ntBASIC6.09□□□□□ -1.43
HLA-DQB1P01920 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.09□□□□□ -1.43
HLA-DQB1P01920 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.09□□□□□ -1.44
HLA-DQB1P01920 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.09□□□□□ -1.44
HLA-DQB1P01920 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
HLA-DQB1P01920 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HLA-DQB1P01920 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
HLA-DQB1P01920 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 EEF1A1P15-201ENST00000395772 1408 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AL391380.1-201ENST00000439300 1432 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AC012213.2-201ENST00000562917 4597 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 AL357556.1-201ENST00000421884 1388 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 KYNUP2-201ENST00000582280 1329 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 RPL24P4-201ENST00000326586 421 ntBASIC6.08□□□□□ -1.44
HLA-DQB1P01920 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HLA-DQB1P01920 RNA5SP514-201ENST00000363717 111 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms