Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 NPM1P46-201ENST00000399556 865 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC010099.3-201ENST00000423896 409 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 USP9YP11-201ENST00000427537 717 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC068137.1-201ENST00000429272 584 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC245517.2-201ENST00000442890 346 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 RPL6P5-201ENST00000445678 828 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 RPSAP54-201ENST00000454001 886 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC092155.2-201ENST00000454675 477 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 COX7A2L-204ENST00000463055 540 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 RN7SL621P-201ENST00000472565 299 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 RPL7AP2-201ENST00000496515 740 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 UGT2B29P-201ENST00000509021 973 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 RNA5SP287-201ENST00000516358 103 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 BUD31P1-201ENST00000521828 359 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC004923.2-201ENST00000529649 369 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AP006437.1-202ENST00000530327 933 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 OR4A1P-201ENST00000532342 920 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC007834.2-201ENST00000536310 343 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC233290.2-201ENST00000552852 390 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC027455.1-201ENST00000574104 594 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 APOC2-202ENST00000585786 880 ntTSL 2 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC084373.1-201ENST00000603311 235 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC005034.2-201ENST00000604464 414 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AL049840.6-201ENST00000604583 345 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC004232.3-201ENST00000622977 525 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC090099.1-204ENST00000623626 849 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AC090617.9-201ENST00000623751 147 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 FMO10P-201ENST00000455032 1493 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 CUL4AP1-201ENST00000514750 1863 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AL669831.5-218ENST00000591702 1873 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 GLRX-202ENST00000379979 1366 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC7.97□□□□□ -1.13
PHC3Q8NDX5 AL034417.4-202ENST00000642135 2236 ntBASIC7.97□□□□□ -1.13
PHC3Q8NDX5 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
PHC3Q8NDX5 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
PHC3Q8NDX5 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.96□□□□□ -1.13
PHC3Q8NDX5 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
PHC3Q8NDX5 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
PHC3Q8NDX5 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.96□□□□□ -1.13
PHC3Q8NDX5 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
PHC3Q8NDX5 AL589993.1-201ENST00000407450 2524 ntBASIC7.96□□□□□ -1.13
PHC3Q8NDX5 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
PHC3Q8NDX5 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.96□□□□□ -1.13
PHC3Q8NDX5 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
PHC3Q8NDX5 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
PHC3Q8NDX5 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
PHC3Q8NDX5 PARP1P1-201ENST00000413631 3026 ntBASIC7.96□□□□□ -1.13
PHC3Q8NDX5 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
PHC3Q8NDX5 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.96□□□□□ -1.14
PHC3Q8NDX5 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PHC3Q8NDX5 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PHC3Q8NDX5 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PHC3Q8NDX5 MS4A2-201ENST00000278888 1152 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PHC3Q8NDX5 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PHC3Q8NDX5 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
PHC3Q8NDX5 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
PHC3Q8NDX5 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC7.96□□□□□ -1.14
PHC3Q8NDX5 RIT1-201ENST00000368322 855 ntTSL 3 BASIC7.96□□□□□ -1.14
PHC3Q8NDX5 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.96□□□□□ -1.14
PHC3Q8NDX5 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC7.96□□□□□ -1.14
PHC3Q8NDX5 RNU6-906P-201ENST00000384700 70 ntBASIC7.96□□□□□ -1.14
PHC3Q8NDX5 AL035698.1-201ENST00000405812 564 ntBASIC7.96□□□□□ -1.14
PHC3Q8NDX5 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PHC3Q8NDX5 SEPT7P8-201ENST00000413308 775 ntBASIC7.96□□□□□ -1.14
PHC3Q8NDX5 HSFY4P-201ENST00000415994 1181 ntBASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms