Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm24818-201ENSMUST00000175093 161 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm20657-201ENSMUST00000177079 515 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Mir7235-201ENSMUST00000183796 56 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Mir7674-201ENSMUST00000184964 63 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm8600-201ENSMUST00000186320 905 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm10292-202ENSMUST00000193165 585 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm43304-201ENSMUST00000196803 326 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm6105-201ENSMUST00000200580 624 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm43925-201ENSMUST00000203498 206 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm18468-201ENSMUST00000207321 369 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm18470-201ENSMUST00000207467 420 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm18465-201ENSMUST00000207468 369 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm18464-201ENSMUST00000207803 420 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm18458-201ENSMUST00000207908 369 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm18461-201ENSMUST00000208421 420 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 AC122225.1-201ENSMUST00000215641 369 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 AC164164.2-201ENSMUST00000221809 785 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm7768-201ENSMUST00000222988 597 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm7040-201ENSMUST00000223271 443 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm24706-201ENSMUST00000082806 137 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm25937-201ENSMUST00000083912 107 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm9386-201ENSMUST00000095195 381 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Scaf4Q6PFF0 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.71□□□□□ -1.65
Scaf4Q6PFF0 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
Scaf4Q6PFF0 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Scaf4Q6PFF0 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Mir676-201ENSMUST00000102443 89 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm6584-201ENSMUST00000119671 447 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Mup-ps28-201ENSMUST00000120686 289 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm14049-201ENSMUST00000121009 636 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Mir3572-201ENSMUST00000175549 86 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm23660-201ENSMUST00000178362 79 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm24088-201ENSMUST00000179100 79 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm25939-201ENSMUST00000179876 191 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Mir6363-201ENSMUST00000184880 114 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm36382-201ENSMUST00000198892 541 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Trav15n-3-201ENSMUST00000200498 168 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm6012-201ENSMUST00000210821 730 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm9202-201ENSMUST00000223036 437 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm26228-201ENSMUST00000082512 107 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm25080-201ENSMUST00000082526 107 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm25792-201ENSMUST00000083289 100 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm22829-201ENSMUST00000083771 106 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm25518-201ENSMUST00000083864 107 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.71□□□□□ -1.66
Scaf4Q6PFF0 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Scaf4Q6PFF0 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms