Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a1Q04857 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Col6a1Q04857 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm23988-201ENSMUST00000117034 122 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm15106-201ENSMUST00000119691 821 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm16017-201ENSMUST00000119834 208 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm24690-201ENSMUST00000157759 97 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm23354-201ENSMUST00000158426 104 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm25718-201ENSMUST00000158632 118 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Mir7047-201ENSMUST00000184595 64 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm9442-201ENSMUST00000194242 319 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm18551-201ENSMUST00000195594 642 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a1Q04857 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm6988-201ENSMUST00000222676 375 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 AC131029.2-202ENSMUST00000228430 496 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm25929-201ENSMUST00000082784 107 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a1Q04857 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a1Q04857 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a1Q04857 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.39□□□□□ -1.55
Col6a1Q04857 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Col6a1Q04857 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a1Q04857 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a1Q04857 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Col6a1Q04857 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col6a1Q04857 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
Col6a1Q04857 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Col6a1Q04857 Synpr-207ENSMUST00000223583 3362 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a1Q04857 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm23424-201ENSMUST00000103889 110 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm11221-201ENSMUST00000117230 597 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm11936-201ENSMUST00000118323 160 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm14915-201ENSMUST00000120747 204 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm25106-201ENSMUST00000122672 134 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm22839-201ENSMUST00000158436 304 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a1Q04857 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a1Q04857 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm2719-201ENSMUST00000191929 444 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm2147-201ENSMUST00000193588 639 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm44385-201ENSMUST00000198781 81 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm18258-201ENSMUST00000210413 542 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm2446-201ENSMUST00000220144 772 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col6a1Q04857 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col6a1Q04857 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Col6a1Q04857 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a1Q04857 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a1Q04857 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a1Q04857 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.38□□□□□ -1.55
Col6a1Q04857 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm14390-201ENSMUST00000117505 1695 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a1Q04857 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a1Q04857 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Col6a1Q04857 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm12427-201ENSMUST00000117719 302 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm13567-201ENSMUST00000118026 247 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm14647-201ENSMUST00000119392 680 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm11556-201ENSMUST00000120751 288 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm14804-201ENSMUST00000122322 508 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC5.37□□□□□ -1.55
Col6a1Q04857 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col6a1Q04857 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Col6a1Q04857 Mir5624-201ENSMUST00000176635 61 ntBASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Col6a1Q04857 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms