Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 BX005195.1-201ENST00000618097 1198 ntBASIC7.69□□□□□ -1.18
NEK3P51956 AC087893.2-201ENST00000623272 255 ntBASIC7.69□□□□□ -1.18
NEK3P51956 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.69□□□□□ -1.18
NEK3P51956 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.69□□□□□ -1.18
NEK3P51956 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
NEK3P51956 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.69□□□□□ -1.18
NEK3P51956 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.69□□□□□ -1.18
NEK3P51956 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NEK3P51956 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NEK3P51956 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NEK3P51956 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NEK3P51956 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NEK3P51956 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NEK3P51956 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.69□□□□□ -1.18
NEK3P51956 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.68□□□□□ -1.18
NEK3P51956 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NEK3P51956 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.68□□□□□ -1.18
NEK3P51956 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.68□□□□□ -1.18
NEK3P51956 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.68□□□□□ -1.18
NEK3P51956 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
NEK3P51956 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NEK3P51956 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NEK3P51956 AC022306.1-201ENST00000560489 1562 ntBASIC7.68□□□□□ -1.18
NEK3P51956 AL353763.1-201ENST00000624467 1628 ntBASIC7.68□□□□□ -1.18
NEK3P51956 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NEK3P51956 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NEK3P51956 SNORD15A-201ENST00000384214 148 ntBASIC7.68□□□□□ -1.18
NEK3P51956 MIR555-201ENST00000384987 96 ntBASIC7.68□□□□□ -1.18
NEK3P51956 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NEK3P51956 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
NEK3P51956 LARP1P1-201ENST00000407692 292 ntBASIC7.68□□□□□ -1.18
NEK3P51956 RPL34P19-201ENST00000415903 342 ntBASIC7.68□□□□□ -1.18
NEK3P51956 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.68□□□□□ -1.18
NEK3P51956 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.68□□□□□ -1.18
NEK3P51956 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.68□□□□□ -1.18
NEK3P51956 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.68□□□□□ -1.18
NEK3P51956 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.68□□□□□ -1.18
NEK3P51956 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC7.68□□□□□ -1.18
NEK3P51956 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC7.68□□□□□ -1.18
NEK3P51956 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.68□□□□□ -1.18
NEK3P51956 GLRXP3-201ENST00000470810 321 ntBASIC7.68□□□□□ -1.18
NEK3P51956 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NEK3P51956 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.68□□□□□ -1.18
NEK3P51956 RPL12P7-201ENST00000493832 494 ntBASIC7.68□□□□□ -1.18
NEK3P51956 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC7.68□□□□□ -1.18
NEK3P51956 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC7.68□□□□□ -1.18
NEK3P51956 RN7SKP105-201ENST00000517192 314 ntBASIC7.68□□□□□ -1.18
NEK3P51956 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.68□□□□□ -1.18
NEK3P51956 AC093283.1-201ENST00000565306 1075 ntBASIC7.68□□□□□ -1.18
NEK3P51956 MIR4685-201ENST00000578185 69 ntBASIC7.68□□□□□ -1.18
NEK3P51956 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.68□□□□□ -1.18
NEK3P51956 AC016629.2-201ENST00000597341 199 ntBASIC7.68□□□□□ -1.18
NEK3P51956 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.68□□□□□ -1.18
NEK3P51956 ANKRD20A19P-203ENST00000602724 295 ntBASIC7.68□□□□□ -1.18
NEK3P51956 AC135050.6-202ENST00000613584 392 ntBASIC7.68□□□□□ -1.18
NEK3P51956 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.68□□□□□ -1.18
NEK3P51956 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC7.68□□□□□ -1.18
NEK3P51956 AL451054.1-201ENST00000621770 772 ntBASIC7.68□□□□□ -1.18
NEK3P51956 AC073263.3-201ENST00000624449 858 ntBASIC7.68□□□□□ -1.18
NEK3P51956 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.68□□□□□ -1.18
NEK3P51956 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC7.68□□□□□ -1.18
NEK3P51956 AC119674.1-209ENST00000642031 997 ntBASIC7.68□□□□□ -1.18
NEK3P51956 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.68□□□□□ -1.18
NEK3P51956 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NEK3P51956 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
NEK3P51956 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.68□□□□□ -1.18
NEK3P51956 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
NEK3P51956 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
NEK3P51956 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NEK3P51956 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
NEK3P51956 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NEK3P51956 AL391262.1-201ENST00000556558 1992 ntBASIC7.68□□□□□ -1.18
NEK3P51956 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NEK3P51956 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.68□□□□□ -1.18
NEK3P51956 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 AL157831.2-201ENST00000564681 3095 ntBASIC7.67□□□□□ -1.18
NEK3P51956 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
NEK3P51956 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.67□□□□□ -1.18
NEK3P51956 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.67□□□□□ -1.18
NEK3P51956 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.67□□□□□ -1.18
NEK3P51956 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.67□□□□□ -1.18
NEK3P51956 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
NEK3P51956 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
NEK3P51956 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
NEK3P51956 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.67□□□□□ -1.18
NEK3P51956 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
NEK3P51956 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
NEK3P51956 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC7.67□□□□□ -1.18
NEK3P51956 AL139806.1-201ENST00000403057 1002 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms