Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm28429-201ENSMUST00000188521 363 ntBASIC4.56□□□□□ -1.68
Lims1Q99JW4 Gm18551-201ENSMUST00000195594 642 ntBASIC4.56□□□□□ -1.68
Lims1Q99JW4 Gm32536-201ENSMUST00000205209 445 ntBASIC4.56□□□□□ -1.68
Lims1Q99JW4 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Lims1Q99JW4 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.56□□□□□ -1.68
Lims1Q99JW4 Gm2446-201ENSMUST00000220144 772 ntBASIC4.56□□□□□ -1.68
Lims1Q99JW4 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.56□□□□□ -1.68
Lims1Q99JW4 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Lims1Q99JW4 Gm26228-201ENSMUST00000082512 107 ntBASIC4.56□□□□□ -1.68
Lims1Q99JW4 Gm25080-201ENSMUST00000082526 107 ntBASIC4.56□□□□□ -1.68
Lims1Q99JW4 Gm25929-201ENSMUST00000082784 107 ntBASIC4.56□□□□□ -1.68
Lims1Q99JW4 Mir27a-201ENSMUST00000083510 87 ntBASIC4.56□□□□□ -1.68
Lims1Q99JW4 Gm25518-201ENSMUST00000083864 107 ntBASIC4.56□□□□□ -1.68
Lims1Q99JW4 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Lims1Q99JW4 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Lims1Q99JW4 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Lims1Q99JW4 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Lims1Q99JW4 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm22676-201ENSMUST00000116972 129 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm12691-201ENSMUST00000120186 456 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm14428-201ENSMUST00000120408 822 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm14601-201ENSMUST00000120892 236 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm14049-201ENSMUST00000121009 636 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm12872-201ENSMUST00000121835 320 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm22958-201ENSMUST00000122512 184 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm8207-201ENSMUST00000171204 502 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm8807-201ENSMUST00000179328 492 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm26180-201ENSMUST00000179942 107 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm27402-201ENSMUST00000183890 120 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm28967-201ENSMUST00000187351 281 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm18924-201ENSMUST00000211929 316 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm9068-201ENSMUST00000217393 455 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm19256-201ENSMUST00000218550 231 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lims1Q99JW4 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm22293-201ENSMUST00000083314 109 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.55□□□□□ -1.68
Lims1Q99JW4 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Lims1Q99JW4 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Lims1Q99JW4 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.54□□□□□ -1.68
Lims1Q99JW4 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.54□□□□□ -1.68
Lims1Q99JW4 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Mir1188-201ENSMUST00000116756 120 ntBASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm13491-201ENSMUST00000118267 235 ntBASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm13755-201ENSMUST00000118509 305 ntBASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm11196-201ENSMUST00000119052 395 ntBASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm14871-201ENSMUST00000119056 194 ntBASIC4.54□□□□□ -1.68
Lims1Q99JW4 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm22343-201ENSMUST00000122648 286 ntBASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm23537-201ENSMUST00000157536 330 ntBASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.54□□□□□ -1.68
Lims1Q99JW4 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm8296-201ENSMUST00000185597 524 ntBASIC4.54□□□□□ -1.68
Lims1Q99JW4 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.54□□□□□ -1.68
Lims1Q99JW4 Gm44011-201ENSMUST00000203336 394 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms