Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Gm24589-201ENSMUST00000116692 94 ntBASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Gm27389-201ENSMUST00000183622 195 ntBASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Gm17808-201ENSMUST00000200859 894 ntBASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col13a1Q9R1N9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Gm16061-201ENSMUST00000122167 857 ntBASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Gm18958-201ENSMUST00000174258 762 ntBASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col13a1Q9R1N9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.67□□□□□ -0.06
Col13a1Q9R1N9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col13a1Q9R1N9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.65□□□□□ -0.06
Col13a1Q9R1N9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms