Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
Rhox4bQ9JI43 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rhox4bQ9JI43 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rhox4bQ9JI43 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rhox4bQ9JI43 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rhox4bQ9JI43 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rhox4bQ9JI43 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.02□□□□□ -0.17
Rhox4bQ9JI43 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rhox4bQ9JI43 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rhox4bQ9JI43 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rhox4bQ9JI43 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rhox4bQ9JI43 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rhox4bQ9JI43 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rhox4bQ9JI43 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Rhox4bQ9JI43 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rhox4bQ9JI43 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rhox4bQ9JI43 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rhox4bQ9JI43 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rhox4bQ9JI43 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Smad6-203ENSMUST00000179458 273 ntBASIC14□□□□□ -0.17
Rhox4bQ9JI43 Gm43137-201ENSMUST00000198052 594 ntBASIC14□□□□□ -0.17
Rhox4bQ9JI43 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rhox4bQ9JI43 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14□□□□□ -0.17
Rhox4bQ9JI43 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rhox4bQ9JI43 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Gm12251-201ENSMUST00000117893 792 ntBASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rhox4bQ9JI43 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rhox4bQ9JI43 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms