Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Gm37179-201ENSMUST00000194862 823 ntBASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mmp1bQ9EPL6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Mmp1bQ9EPL6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Gm12933-201ENSMUST00000120203 872 ntBASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Mmp1bQ9EPL6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Mir5133-201ENSMUST00000174955 77 ntBASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp1bQ9EPL6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.22■□□□□ 0.03
Mmp1bQ9EPL6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms