Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Lsm7Q9CQQ8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm7Q9CQQ8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Lsm7Q9CQQ8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm7Q9CQQ8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm7Q9CQQ8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Lsm7Q9CQQ8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm7Q9CQQ8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.52■□□□□ 0.4
Lsm7Q9CQQ8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm7Q9CQQ8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm7Q9CQQ8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm7Q9CQQ8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Lsm7Q9CQQ8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm7Q9CQQ8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm7Q9CQQ8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm7Q9CQQ8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Lsm7Q9CQQ8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Gm16061-201ENSMUST00000122167 857 ntBASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Lsm7Q9CQQ8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Gm13474-201ENSMUST00000122466 815 ntBASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Il3ra-202ENSMUST00000223589 738 ntBASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lsm7Q9CQQ8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm7Q9CQQ8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.49■□□□□ 0.39
Lsm7Q9CQQ8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm7Q9CQQ8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm7Q9CQQ8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm7Q9CQQ8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm7Q9CQQ8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm7Q9CQQ8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm7Q9CQQ8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm7Q9CQQ8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.49■□□□□ 0.39
Lsm7Q9CQQ8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Lsm7Q9CQQ8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm7Q9CQQ8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Gm17661-201ENSMUST00000170317 270 ntBASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm7Q9CQQ8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms