Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lysmd3Q99LE3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Gm7977-201ENSMUST00000193787 748 ntBASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Lysmd3Q99LE3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Gm18959-201ENSMUST00000208954 655 ntBASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Gm9731-201ENSMUST00000209480 747 ntBASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lysmd3Q99LE3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Gm2274-201ENSMUST00000184539 609 ntBASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lysmd3Q99LE3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd3Q99LE3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd3Q99LE3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd3Q99LE3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd3Q99LE3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd3Q99LE3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd3Q99LE3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lysmd3Q99LE3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Lysmd3Q99LE3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms