Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Smc1bQ920F6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc1bQ920F6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc1bQ920F6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Smc1bQ920F6 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.94■□□□□ 0.78
Smc1bQ920F6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc1bQ920F6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc1bQ920F6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Smc1bQ920F6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc1bQ920F6 Gm25016-201ENSMUST00000158399 131 ntBASIC19.94■□□□□ 0.78
Smc1bQ920F6 Gm22697-201ENSMUST00000175194 63 ntBASIC19.94■□□□□ 0.78
Smc1bQ920F6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Smc1bQ920F6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc1bQ920F6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc1bQ920F6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Smc1bQ920F6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc1bQ920F6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smc1bQ920F6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Gm7284-201ENSMUST00000131667 944 ntBASIC19.93■□□□□ 0.78
Smc1bQ920F6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Gm17971-201ENSMUST00000190239 806 ntBASIC19.93■□□□□ 0.78
Smc1bQ920F6 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.93■□□□□ 0.78
Smc1bQ920F6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.93■□□□□ 0.78
Smc1bQ920F6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smc1bQ920F6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Smc1bQ920F6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.92■□□□□ 0.78
Smc1bQ920F6 Fst-202ENSMUST00000223640 2612 ntBASIC19.92■□□□□ 0.78
Smc1bQ920F6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.92■□□□□ 0.78
Smc1bQ920F6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.92■□□□□ 0.78
Smc1bQ920F6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smc1bQ920F6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Smc1bQ920F6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
Smc1bQ920F6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc1bQ920F6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.91■□□□□ 0.78
Smc1bQ920F6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc1bQ920F6 Gm12085-201ENSMUST00000119263 940 ntBASIC19.91■□□□□ 0.78
Smc1bQ920F6 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smc1bQ920F6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc1bQ920F6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Smc1bQ920F6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc1bQ920F6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smc1bQ920F6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smc1bQ920F6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Smc1bQ920F6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Gm17661-201ENSMUST00000170317 270 ntBASIC19.9■□□□□ 0.78
Smc1bQ920F6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Smc1bQ920F6 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.9■□□□□ 0.78
Smc1bQ920F6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.9■□□□□ 0.78
Smc1bQ920F6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smc1bQ920F6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smc1bQ920F6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smc1bQ920F6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smc1bQ920F6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms