Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhgb5Q91XX5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb5Q91XX5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb5Q91XX5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb5Q91XX5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhgb5Q91XX5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb5Q91XX5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhgb5Q91XX5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Pcdhgb5Q91XX5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb5Q91XX5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb5Q91XX5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcdhgb5Q91XX5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb5Q91XX5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb5Q91XX5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhgb5Q91XX5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb5Q91XX5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb5Q91XX5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb5Q91XX5 Gm7284-201ENSMUST00000131667 944 ntBASIC17.17■□□□□ 0.34
Pcdhgb5Q91XX5 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb5Q91XX5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb5Q91XX5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb5Q91XX5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb5Q91XX5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb5Q91XX5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb5Q91XX5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.17■□□□□ 0.34
Pcdhgb5Q91XX5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhgb5Q91XX5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgb5Q91XX5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgb5Q91XX5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Gm11355-201ENSMUST00000121120 306 ntBASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgb5Q91XX5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhgb5Q91XX5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgb5Q91XX5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms