Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rpa1Q8VEE4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.47■□□□□ 0.39
Rpa1Q8VEE4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.46■□□□□ 0.39
Rpa1Q8VEE4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpa1Q8VEE4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rpa1Q8VEE4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.46■□□□□ 0.39
Rpa1Q8VEE4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Rpa1Q8VEE4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rpa1Q8VEE4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rpa1Q8VEE4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpa1Q8VEE4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpa1Q8VEE4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpa1Q8VEE4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpa1Q8VEE4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpa1Q8VEE4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rpa1Q8VEE4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rpa1Q8VEE4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms