Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rprd1aQ8VDS4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rprd1aQ8VDS4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 Mir7071-201ENSMUST00000184847 69 ntBASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.8■□□□□ 0.44
Rprd1aQ8VDS4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rprd1aQ8VDS4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rprd1aQ8VDS4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rprd1aQ8VDS4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rprd1aQ8VDS4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rprd1aQ8VDS4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rprd1aQ8VDS4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rprd1aQ8VDS4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rprd1aQ8VDS4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rprd1aQ8VDS4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Rprd1aQ8VDS4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.76■□□□□ 0.43
Rprd1aQ8VDS4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rprd1aQ8VDS4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Rprd1aQ8VDS4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms