Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup35Q8R4R6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Gm42778-201ENSMUST00000199644 553 ntBASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup35Q8R4R6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Nup35Q8R4R6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup35Q8R4R6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup35Q8R4R6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup35Q8R4R6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup35Q8R4R6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms