Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Tmc1Q8R4P5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC21.2■□□□□ 0.98
Tmc1Q8R4P5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmc1Q8R4P5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmc1Q8R4P5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tmc1Q8R4P5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.2■□□□□ 0.98
Tmc1Q8R4P5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmc1Q8R4P5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmc1Q8R4P5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmc1Q8R4P5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmc1Q8R4P5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.18■□□□□ 0.98
Tmc1Q8R4P5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmc1Q8R4P5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.18■□□□□ 0.98
Tmc1Q8R4P5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.18■□□□□ 0.98
Tmc1Q8R4P5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.18■□□□□ 0.98
Tmc1Q8R4P5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tmc1Q8R4P5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC21.18■□□□□ 0.98
Tmc1Q8R4P5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmc1Q8R4P5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmc1Q8R4P5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
Tmc1Q8R4P5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Tmc1Q8R4P5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmc1Q8R4P5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmc1Q8R4P5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmc1Q8R4P5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmc1Q8R4P5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmc1Q8R4P5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmc1Q8R4P5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmc1Q8R4P5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmc1Q8R4P5 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmc1Q8R4P5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmc1Q8R4P5 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Gm26524-201ENSMUST00000192339 390 ntBASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tmc1Q8R4P5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tmc1Q8R4P5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.14■□□□□ 0.98
Tmc1Q8R4P5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 Rab3c-203ENSMUST00000224180 967 ntBASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tmc1Q8R4P5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms