Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rd3Q8BRE0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rd3Q8BRE0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rd3Q8BRE0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rd3Q8BRE0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Gm27741-201ENSMUST00000185060 237 ntBASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Grk6-206ENSMUST00000224995 2971 ntBASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rd3Q8BRE0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Il3ra-202ENSMUST00000223589 738 ntBASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rd3Q8BRE0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Mir1668-201ENSMUST00000184114 107 ntBASIC18.37■□□□□ 0.53
Rd3Q8BRE0 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rd3Q8BRE0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rd3Q8BRE0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.36■□□□□ 0.53
Rd3Q8BRE0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rd3Q8BRE0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rd3Q8BRE0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rd3Q8BRE0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Rd3Q8BRE0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rd3Q8BRE0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rd3Q8BRE0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rd3Q8BRE0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rd3Q8BRE0 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rd3Q8BRE0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Gm5587-201ENSMUST00000206270 674 ntBASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rd3Q8BRE0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rd3Q8BRE0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rd3Q8BRE0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rd3Q8BRE0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rd3Q8BRE0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rd3Q8BRE0 Gm27704-201ENSMUST00000185094 107 ntBASIC18.34■□□□□ 0.53
Rd3Q8BRE0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.34■□□□□ 0.53
Rd3Q8BRE0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rd3Q8BRE0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rd3Q8BRE0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rd3Q8BRE0 Iqck-206ENSMUST00000208658 2891 ntBASIC18.34■□□□□ 0.53
Rd3Q8BRE0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rd3Q8BRE0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rd3Q8BRE0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rd3Q8BRE0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rd3Q8BRE0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rd3Q8BRE0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rd3Q8BRE0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms