Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smndc1Q8BGT7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smndc1Q8BGT7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smndc1Q8BGT7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Gm12933-201ENSMUST00000120203 872 ntBASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smndc1Q8BGT7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smndc1Q8BGT7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smndc1Q8BGT7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smndc1Q8BGT7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smndc1Q8BGT7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smndc1Q8BGT7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Smndc1Q8BGT7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smndc1Q8BGT7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Smndc1Q8BGT7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smndc1Q8BGT7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smndc1Q8BGT7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 413.3 ms