Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Prpf40bQ80W14 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Prpf40bQ80W14 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Prpf40bQ80W14 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.93■□□□□ 0.78
Prpf40bQ80W14 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf40bQ80W14 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf40bQ80W14 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf40bQ80W14 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf40bQ80W14 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Prpf40bQ80W14 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf40bQ80W14 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Prpf40bQ80W14 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf40bQ80W14 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf40bQ80W14 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf40bQ80W14 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf40bQ80W14 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Prpf40bQ80W14 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Prpf40bQ80W14 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Prpf40bQ80W14 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.9■□□□□ 0.78
Prpf40bQ80W14 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Gm18669-201ENSMUST00000216049 778 ntBASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Prpf40bQ80W14 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Prpf40bQ80W14 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Prpf40bQ80W14 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Prpf40bQ80W14 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf40bQ80W14 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.89■□□□□ 0.77
Prpf40bQ80W14 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf40bQ80W14 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Prpf40bQ80W14 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms