Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abcf1Q6P542 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.4■□□□□ 0.7
Abcf1Q6P542 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.4■□□□□ 0.7
Abcf1Q6P542 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abcf1Q6P542 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Abcf1Q6P542 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Abcf1Q6P542 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Abcf1Q6P542 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Abcf1Q6P542 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Abcf1Q6P542 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Gm27011-201ENSMUST00000182352 972 ntBASIC19.38■□□□□ 0.69
Abcf1Q6P542 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Gm20049-201ENSMUST00000219950 730 ntBASIC19.38■□□□□ 0.69
Abcf1Q6P542 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Abcf1Q6P542 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf1Q6P542 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf1Q6P542 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf1Q6P542 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf1Q6P542 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf1Q6P542 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Abcf1Q6P542 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.37■□□□□ 0.69
Abcf1Q6P542 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf1Q6P542 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf1Q6P542 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC19.37■□□□□ 0.69
Abcf1Q6P542 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf1Q6P542 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.37■□□□□ 0.69
Abcf1Q6P542 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf1Q6P542 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf1Q6P542 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Abcf1Q6P542 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf1Q6P542 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.36■□□□□ 0.69
Abcf1Q6P542 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf1Q6P542 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Abcf1Q6P542 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Abcf1Q6P542 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Abcf1Q6P542 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.35■□□□□ 0.69
Abcf1Q6P542 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Gm44549-201ENSMUST00000208351 577 ntBASIC19.35■□□□□ 0.69
Abcf1Q6P542 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.35■□□□□ 0.69
Abcf1Q6P542 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Abcf1Q6P542 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Abcf1Q6P542 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms