Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctnna3Q65CL1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ctnna3Q65CL1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctnna3Q65CL1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ctnna3Q65CL1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctnna3Q65CL1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctnna3Q65CL1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctnna3Q65CL1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ctnna3Q65CL1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ctnna3Q65CL1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Mir2861-201ENSMUST00000175539 82 ntBASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Gm30025-201ENSMUST00000218555 728 ntBASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ctnna3Q65CL1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ctnna3Q65CL1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctnna3Q65CL1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctnna3Q65CL1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Ctnna3Q65CL1 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.45■□□□□ 0.7
Ctnna3Q65CL1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctnna3Q65CL1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctnna3Q65CL1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctnna3Q65CL1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Ctnna3Q65CL1 Gm21814-202ENSMUST00000203277 873 ntBASIC19.45■□□□□ 0.7
Ctnna3Q65CL1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctnna3Q65CL1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.45■□□□□ 0.7
Ctnna3Q65CL1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctnna3Q65CL1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ctnna3Q65CL1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctnna3Q65CL1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctnna3Q65CL1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms