Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.71□□□□□ -0.37
Foxc1Q61572 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Foxc1Q61572 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Foxc1Q61572 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Foxc1Q61572 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Foxc1Q61572 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Foxc1Q61572 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Foxc1Q61572 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Foxc1Q61572 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Foxc1Q61572 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Foxc1Q61572 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Foxc1Q61572 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Foxc1Q61572 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Foxc1Q61572 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Foxc1Q61572 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Foxc1Q61572 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12.7□□□□□ -0.38
Foxc1Q61572 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Foxc1Q61572 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Foxc1Q61572 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.7□□□□□ -0.38
Foxc1Q61572 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.7□□□□□ -0.38
Foxc1Q61572 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Foxc1Q61572 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.7□□□□□ -0.38
Foxc1Q61572 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Foxc1Q61572 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxc1Q61572 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Foxc1Q61572 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxc1Q61572 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxc1Q61572 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Foxc1Q61572 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.69□□□□□ -0.38
Foxc1Q61572 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxc1Q61572 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxc1Q61572 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.69□□□□□ -0.38
Foxc1Q61572 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Foxc1Q61572 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxc1Q61572 Gm715-201ENSMUST00000117865 831 ntBASIC12.69□□□□□ -0.38
Foxc1Q61572 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.69□□□□□ -0.38
Foxc1Q61572 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.69□□□□□ -0.38
Foxc1Q61572 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxc1Q61572 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.69□□□□□ -0.38
Foxc1Q61572 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxc1Q61572 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Foxc1Q61572 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Foxc1Q61572 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Foxc1Q61572 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxc1Q61572 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxc1Q61572 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxc1Q61572 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Foxc1Q61572 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Foxc1Q61572 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Foxc1Q61572 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.68□□□□□ -0.38
Foxc1Q61572 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.68□□□□□ -0.38
Foxc1Q61572 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.68□□□□□ -0.38
Foxc1Q61572 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.68□□□□□ -0.38
Foxc1Q61572 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Foxc1Q61572 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Foxc1Q61572 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.68□□□□□ -0.38
Foxc1Q61572 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Foxc1Q61572 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Foxc1Q61572 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxc1Q61572 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxc1Q61572 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxc1Q61572 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Foxc1Q61572 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxc1Q61572 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.67□□□□□ -0.38
Foxc1Q61572 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Foxc1Q61572 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxc1Q61572 Gm10418-201ENSMUST00000100943 576 ntBASIC12.67□□□□□ -0.38
Foxc1Q61572 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Foxc1Q61572 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.67□□□□□ -0.38
Foxc1Q61572 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.67□□□□□ -0.38
Foxc1Q61572 AC132260.2-201ENSMUST00000224482 344 ntBASIC12.67□□□□□ -0.38
Foxc1Q61572 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Foxc1Q61572 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms