Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav2Q5R1I9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Gm10231-201ENSMUST00000181584 441 ntBASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Gm2274-201ENSMUST00000184539 609 ntBASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Gm10175-202ENSMUST00000208752 441 ntBASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav2Q5R1I9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Fst-202ENSMUST00000223640 2612 ntBASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Gm37025-201ENSMUST00000195159 829 ntBASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.81□□□□□ -0.2
Trav2Q5R1I9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav2Q5R1I9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav2Q5R1I9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav2Q5R1I9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav2Q5R1I9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav2Q5R1I9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav2Q5R1I9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav2Q5R1I9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav2Q5R1I9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav2Q5R1I9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.8□□□□□ -0.2
Trav2Q5R1I9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav2Q5R1I9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav2Q5R1I9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav2Q5R1I9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav2Q5R1I9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav2Q5R1I9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav2Q5R1I9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms