Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6d-4Q5R1I0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav6d-4Q5R1I0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Gm2274-201ENSMUST00000184539 609 ntBASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Gm7791-201ENSMUST00000219066 539 ntBASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav6d-4Q5R1I0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Gm18959-201ENSMUST00000208954 655 ntBASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Gm9731-201ENSMUST00000209480 747 ntBASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav6d-4Q5R1I0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Gm10231-201ENSMUST00000181584 441 ntBASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Gm10175-202ENSMUST00000208752 441 ntBASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-4Q5R1I0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms