Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav7d-4Q5R1H9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.24□□□□□ -0.29
Trav7d-4Q5R1H9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Gm15546-201ENSMUST00000122095 826 ntBASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav7d-4Q5R1H9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav7d-4Q5R1H9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Gm12251-201ENSMUST00000117893 792 ntBASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav7d-4Q5R1H9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.21□□□□□ -0.3
Trav7d-4Q5R1H9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms