Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.56□□□□□ -0.4
Cks1brtQ3UNC9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Gm12366-201ENSMUST00000121722 873 ntBASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Gm5786-201ENSMUST00000085368 882 ntBASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Dancr-204ENSMUST00000132389 2347 ntBASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Cks1brtQ3UNC9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cks1brtQ3UNC9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Tgds-204ENSMUST00000228543 1594 ntBASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Gm43759-201ENSMUST00000196925 1261 ntBASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cks1brtQ3UNC9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1brtQ3UNC9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1brtQ3UNC9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1brtQ3UNC9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1brtQ3UNC9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.4
Cks1brtQ3UNC9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1brtQ3UNC9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cks1brtQ3UNC9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cks1brtQ3UNC9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms