Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Shcbp1lQ3TTP0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Shcbp1lQ3TTP0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Shcbp1lQ3TTP0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Gm24841-201ENSMUST00000158676 357 ntBASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Shcbp1lQ3TTP0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shcbp1lQ3TTP0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Gm18959-201ENSMUST00000208954 655 ntBASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.42■□□□□ 0.38
Shcbp1lQ3TTP0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shcbp1lQ3TTP0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms