Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lrfn1Q2WF71 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrfn1Q2WF71 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrfn1Q2WF71 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Lrfn1Q2WF71 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Lrfn1Q2WF71 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrfn1Q2WF71 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Lrfn1Q2WF71 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrfn1Q2WF71 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lrfn1Q2WF71 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrfn1Q2WF71 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Lrfn1Q2WF71 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrfn1Q2WF71 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrfn1Q2WF71 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16■□□□□ 0.15
Lrfn1Q2WF71 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16■□□□□ 0.15
Lrfn1Q2WF71 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Lrfn1Q2WF71 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lrfn1Q2WF71 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lrfn1Q2WF71 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lrfn1Q2WF71 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lrfn1Q2WF71 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lrfn1Q2WF71 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lrfn1Q2WF71 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lrfn1Q2WF71 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Lrfn1Q2WF71 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lrfn1Q2WF71 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Lrfn1Q2WF71 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms