Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Gm15372-201ENSMUST00000120729 834 ntBASIC19.48■□□□□ 0.71
Brca1P48754 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.48■□□□□ 0.71
Brca1P48754 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Brca1P48754 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Brca1P48754 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Brca1P48754 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brca1P48754 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Brca1P48754 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brca1P48754 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brca1P48754 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brca1P48754 Gm18421-201ENSMUST00000204122 625 ntBASIC19.47■□□□□ 0.71
Brca1P48754 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Brca1P48754 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brca1P48754 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brca1P48754 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Brca1P48754 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brca1P48754 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brca1P48754 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brca1P48754 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brca1P48754 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Brca1P48754 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Brca1P48754 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Brca1P48754 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brca1P48754 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brca1P48754 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Brca1P48754 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Brca1P48754 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brca1P48754 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brca1P48754 Gm11336-201ENSMUST00000118168 334 ntBASIC19.46■□□□□ 0.71
Brca1P48754 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.46■□□□□ 0.71
Brca1P48754 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brca1P48754 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brca1P48754 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brca1P48754 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Brca1P48754 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Brca1P48754 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Brca1P48754 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Brca1P48754 Gm13186-201ENSMUST00000118031 316 ntBASIC19.45■□□□□ 0.7
Brca1P48754 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Brca1P48754 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Brca1P48754 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Brca1P48754 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Brca1P48754 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.45■□□□□ 0.7
Brca1P48754 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Brca1P48754 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Brca1P48754 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Brca1P48754 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Brca1P48754 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Brca1P48754 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.44■□□□□ 0.7
Brca1P48754 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Brca1P48754 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Brca1P48754 Mir5126-201ENSMUST00000175513 77 ntBASIC19.44■□□□□ 0.7
Brca1P48754 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.44■□□□□ 0.7
Brca1P48754 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Brca1P48754 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Brca1P48754 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Brca1P48754 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Brca1P48754 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Brca1P48754 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.44■□□□□ 0.7
Brca1P48754 Fst-202ENSMUST00000223640 2612 ntBASIC19.44■□□□□ 0.7
Brca1P48754 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Brca1P48754 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.44■□□□□ 0.7
Brca1P48754 Gm44450-201ENSMUST00000199528 114 ntBASIC19.44■□□□□ 0.7
Brca1P48754 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Brca1P48754 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Brca1P48754 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Brca1P48754 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Brca1P48754 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Brca1P48754 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brca1P48754 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Brca1P48754 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brca1P48754 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brca1P48754 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.43■□□□□ 0.7
Brca1P48754 Gm12644-201ENSMUST00000119935 606 ntBASIC19.43■□□□□ 0.7
Brca1P48754 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brca1P48754 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.43■□□□□ 0.7
Brca1P48754 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Brca1P48754 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Brca1P48754 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brca1P48754 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Brca1P48754 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Brca1P48754 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Brca1P48754 Phf7-203ENSMUST00000226565 1971 ntBASIC19.43■□□□□ 0.7
Brca1P48754 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Brca1P48754 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.42■□□□□ 0.7
Brca1P48754 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.42■□□□□ 0.7
Brca1P48754 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Brca1P48754 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brca1P48754 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Brca1P48754 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brca1P48754 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.41■□□□□ 0.7
Brca1P48754 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.41■□□□□ 0.7
Brca1P48754 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca1P48754 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms