Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.3□□□□□ -0.12
Hist1h1aP43275 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hist1h1aP43275 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Idnk-204ENSMUST00000226010 1898 ntBASIC14.29□□□□□ -0.12
Hist1h1aP43275 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Gm6365-201ENSMUST00000054711 744 ntBASIC14.29□□□□□ -0.12
Hist1h1aP43275 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.29□□□□□ -0.12
Hist1h1aP43275 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Hist1h1aP43275 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Hist1h1aP43275 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.28□□□□□ -0.12
Hist1h1aP43275 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.28□□□□□ -0.12
Hist1h1aP43275 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.28□□□□□ -0.12
Hist1h1aP43275 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.28□□□□□ -0.12
Hist1h1aP43275 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hist1h1aP43275 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.28□□□□□ -0.12
Hist1h1aP43275 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hist1h1aP43275 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hist1h1aP43275 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hist1h1aP43275 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hist1h1aP43275 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hist1h1aP43275 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Hist1h1aP43275 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hist1h1aP43275 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hist1h1aP43275 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hist1h1aP43275 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hist1h1aP43275 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hist1h1aP43275 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Hist1h1aP43275 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hist1h1aP43275 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hist1h1aP43275 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hist1h1aP43275 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hist1h1aP43275 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hist1h1aP43275 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hist1h1aP43275 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hist1h1aP43275 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Hist1h1aP43275 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1aP43275 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hist1h1aP43275 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms