Protein–RNA interactions for Protein: P38805

RPF1, Ribosome production factor 1, yeastyeast

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPF1P38805 STF2YGR008C 255 nt0.25□□□□□ -2.37
RPF1P38805 YJL120WYJL120W 324 nt0.25□□□□□ -2.37
RPF1P38805 YLR202CYLR202C 327 nt0.25□□□□□ -2.37
RPF1P38805 YLR399W-AYLR399W-A 105 nt0.24□□□□□ -2.37
RPF1P38805 YDL185C-AYDL185C-A 228 nt0.23□□□□□ -2.37
RPF1P38805 RPS30BYOR182C 192 nt0.23□□□□□ -2.37
RPF1P38805 PRP42YDR235W 1635 nt0.23□□□□□ -2.37
RPF1P38805 YER137W-AYER137W-A 306 nt0.22□□□□□ -2.37
RPF1P38805 YHR007C-AYHR007C-A 216 nt0.22□□□□□ -2.37
RPF1P38805 YHR138CYHR138C 345 nt0.22□□□□□ -2.37
RPF1P38805 YAL067W-AYAL067W-A 228 nt0.22□□□□□ -2.37
RPF1P38805 snR190snR190 190 nt0.22□□□□□ -2.37
RPF1P38805 YBR285WYBR285W 435 nt0.22□□□□□ -2.37
RPF1P38805 YCR018C-AYCR018C-A 255 nt0.21□□□□□ -2.38
RPF1P38805 PRM3YPL192C 402 nt0.21□□□□□ -2.38
RPF1P38805 ULP2YIL031W 3105 nt0.21□□□□□ -2.38
RPF1P38805 BEM3YPL115C 3387 nt0.2□□□□□ -2.38
RPF1P38805 YBL100W-BYBL100W-B 5313 nt0.2□□□□□ -2.38
RPF1P38805 AI1Q0050 2505 nt0.2□□□□□ -2.38
RPF1P38805 YER079WYER079W 633 nt0.2□□□□□ -2.38
RPF1P38805 YKL145W-AYKL145W-A 93 nt0.2□□□□□ -2.38
RPF1P38805 MLP1YKR095W 5628 nt0.2□□□□□ -2.38
RPF1P38805 HAL9YOL089C 3093 nt0.19□□□□□ -2.38
RPF1P38805 YJR157WYJR157W 363 nt0.19□□□□□ -2.38
RPF1P38805 Q0017Q0017 162 nt0.19□□□□□ -2.38
RPF1P38805 AGA2YGL032C 264 nt0.18□□□□□ -2.38
RPF1P38805 YOR345CYOR345C 351 nt0.18□□□□□ -2.38
RPF1P38805 YAR053WYAR053W 297 nt0.17□□□□□ -2.38
RPF1P38805 HUG1YML058W-A 207 nt0.17□□□□□ -2.38
RPF1P38805 YMR307C-AYMR307C-A 195 nt0.17□□□□□ -2.38
RPF1P38805 YNL324WYNL324W 396 nt0.17□□□□□ -2.38
RPF1P38805 YOR121CYOR121C 306 nt0.17□□□□□ -2.38
RPF1P38805 RPL35AYDL191W 363 nt0.16□□□□□ -2.38
RPF1P38805 SSS1YDR086C 243 nt0.16□□□□□ -2.38
RPF1P38805 tF(GAA)BtF(GAA)B 73 nt0.16□□□□□ -2.38
RPF1P38805 tF(GAA)FtF(GAA)F 73 nt0.16□□□□□ -2.38
RPF1P38805 tF(GAA)GtF(GAA)G 73 nt0.16□□□□□ -2.38
RPF1P38805 tF(GAA)H1tF(GAA)H1 73 nt0.16□□□□□ -2.38
RPF1P38805 tF(GAA)H2tF(GAA)H2 73 nt0.16□□□□□ -2.38
RPF1P38805 tF(GAA)MtF(GAA)M 73 nt0.16□□□□□ -2.38
RPF1P38805 tF(GAA)P1tF(GAA)P1 73 nt0.16□□□□□ -2.38
RPF1P38805 tF(GAA)P2tF(GAA)P2 73 nt0.16□□□□□ -2.38
RPF1P38805 tN(GUU)QtN(GUU)Q 71 nt0.16□□□□□ -2.38
RPF1P38805 HTB2YBL002W 396 nt0.16□□□□□ -2.38
RPF1P38805 YOR032W-AYOR032W-A 201 nt0.16□□□□□ -2.38
RPF1P38805 STE5YDR103W 2754 nt0.15□□□□□ -2.39
RPF1P38805 YOL013W-AYOL013W-A 192 nt0.15□□□□□ -2.39
RPF1P38805 ORC3YLL004W 1851 nt0.15□□□□□ -2.39
RPF1P38805 YDR371C-AYDR371C-A 105 nt0.14□□□□□ -2.39
RPF1P38805 tW(UCA)QtW(UCA)Q 74 nt0.14□□□□□ -2.39
RPF1P38805 LEE1YPL054W 906 nt0.14□□□□□ -2.39
RPF1P38805 BIR1YJR089W 2865 nt0.14□□□□□ -2.39
RPF1P38805 TRS65YGR166W 1683 nt0.14□□□□□ -2.39
RPF1P38805 IQG1YPL242C 4488 nt0.14□□□□□ -2.39
RPF1P38805 YDR354C-AYDR354C-A 144 nt0.13□□□□□ -2.39
RPF1P38805 YMR001C-AYMR001C-A 231 nt0.13□□□□□ -2.39
RPF1P38805 NNF2YGR089W 2811 nt0.13□□□□□ -2.39
RPF1P38805 ESP1YGR098C 4893 nt0.12□□□□□ -2.39
RPF1P38805 RPS26AYGL189C 360 nt0.12□□□□□ -2.39
RPF1P38805 YLR264C-AYLR264C-A 117 nt0.12□□□□□ -2.39
RPF1P38805 COG8YML071C 1824 nt0.1□□□□□ -2.39
RPF1P38805 YKL136WYKL136W 399 nt0.1□□□□□ -2.39
RPF1P38805 YPR092WYPR092W 306 nt0.1□□□□□ -2.39
RPF1P38805 YDR048CYDR048C 315 nt0.09□□□□□ -2.4
RPF1P38805 YLR282CYLR282C 342 nt0.09□□□□□ -2.4
RPF1P38805 YNL146WYNL146W 303 nt0.09□□□□□ -2.4
RPF1P38805 RCO1YMR075W 2055 nt0.09□□□□□ -2.4
RPF1P38805 ULI1YFR026C 510 nt0.08□□□□□ -2.4
RPF1P38805 YIL115W-AYIL115W-A 372 nt0.08□□□□□ -2.4
RPF1P38805 BIL1YOR304C-A 231 nt0.08□□□□□ -2.4
RPF1P38805 RPS27BYHR021C 249 nt0.07□□□□□ -2.4
RPF1P38805 COY1YKL179C 2040 nt0.07□□□□□ -2.4
RPF1P38805 YNL054W-BYNL054W-B 5250 nt0.06□□□□□ -2.4
RPF1P38805 YJL026C-AYJL026C-A 222 nt0.06□□□□□ -2.4
RPF1P38805 YAL068W-AYAL068W-A 255 nt0.06□□□□□ -2.4
RPF1P38805 YOR293C-AYOR293C-A 150 nt0.06□□□□□ -2.4
RPF1P38805 NIP1YMR309C 2439 nt0.05□□□□□ -2.4
RPF1P38805 YCR022CYCR022C 345 nt0.05□□□□□ -2.4
RPF1P38805 COX12YLR038C 252 nt0.05□□□□□ -2.4
RPF1P38805 YOL014WYOL014W 375 nt0.05□□□□□ -2.4
RPF1P38805 THO2YNL139C 4794 nt0.05□□□□□ -2.4
RPF1P38805 CSE2YNR010W 450 nt0.03□□□□□ -2.4
RPF1P38805 YOR161W-AYOR161W-A 81 nt0.03□□□□□ -2.4
RPF1P38805 YOR186C-AYOR186C-A 210 nt0.03□□□□□ -2.4
RPF1P38805 MLP2YIL149C 5040 nt0.03□□□□□ -2.41
RPF1P38805 YLL006W-AYLL006W-A 177 nt0.02□□□□□ -2.41
RPF1P38805 YGR035CYGR035C 351 nt0.01□□□□□ -2.41
RPF1P38805 YHR131W-AYHR131W-A 246 nt0.01□□□□□ -2.41
RPF1P38805 YGL123C-AYGL123C-A 231 nt0□□□□□ -2.41
RPF1P38805 YEL020C-BYEL020C-B 198 nt-0.01□□□□□ -2.41
RPF1P38805 BLI1YKL061W 342 nt-0.01□□□□□ -2.41
RPF1P38805 YAL063C-AYAL063C-A 291 nt-0.02□□□□□ -2.41
RPF1P38805 YLR154W-FYLR154W-F 141 nt-0.02□□□□□ -2.41
RPF1P38805 snR60snR60 104 nt-0.03□□□□□ -2.41
RPF1P38805 YKU70YMR284W 1809 nt-0.03□□□□□ -2.42
RPF1P38805 YER078W-AYER078W-A 165 nt-0.04□□□□□ -2.42
RPF1P38805 BUL2YML111W 2763 nt-0.05□□□□□ -2.42
RPF1P38805 SNU13YEL026W 381 nt-0.05□□□□□ -2.42
RPF1P38805 YLL019W-AYLL019W-A 93 nt-0.05□□□□□ -2.42
RPF1P38805 YFL063WYFL063W 456 nt-0.06□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 14 ms