Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Cdx1P18111 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx1P18111 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdx1P18111 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.98□□□□□ -0.17
Cdx1P18111 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.97□□□□□ -0.17
Cdx1P18111 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Mir5133-201ENSMUST00000174955 77 ntBASIC13.97□□□□□ -0.17
Cdx1P18111 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cdx1P18111 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cdx1P18111 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.97□□□□□ -0.17
Cdx1P18111 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdx1P18111 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdx1P18111 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Cdx1P18111 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx1P18111 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx1P18111 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx1P18111 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx1P18111 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx1P18111 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx1P18111 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx1P18111 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx1P18111 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.96□□□□□ -0.17
Cdx1P18111 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx1P18111 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdx1P18111 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdx1P18111 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdx1P18111 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cdx1P18111 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Cdx1P18111 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Cdx1P18111 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdx1P18111 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdx1P18111 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdx1P18111 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Cdx1P18111 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cdx1P18111 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Cdx1P18111 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Gm12441-201ENSMUST00000121806 588 ntBASIC13.95□□□□□ -0.18
Cdx1P18111 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.95□□□□□ -0.18
Cdx1P18111 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdx1P18111 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cdx1P18111 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdx1P18111 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdx1P18111 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdx1P18111 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdx1P18111 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdx1P18111 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdx1P18111 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdx1P18111 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdx1P18111 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.94□□□□□ -0.18
Cdx1P18111 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cdx1P18111 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdx1P18111 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdx1P18111 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdx1P18111 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdx1P18111 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdx1P18111 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdx1P18111 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cdx1P18111 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdx1P18111 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdx1P18111 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdx1P18111 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.93□□□□□ -0.18
Cdx1P18111 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms