Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pax1P09084 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Pax1P09084 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pax1P09084 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pax1P09084 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pax1P09084 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pax1P09084 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pax1P09084 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pax1P09084 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pax1P09084 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pax1P09084 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pax1P09084 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pax1P09084 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pax1P09084 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pax1P09084 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.04□□□□□ -0.16
Pax1P09084 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Pax1P09084 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pax1P09084 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.04□□□□□ -0.16
Pax1P09084 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pax1P09084 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pax1P09084 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.04□□□□□ -0.16
Pax1P09084 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pax1P09084 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pax1P09084 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pax1P09084 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pax1P09084 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pax1P09084 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Pax1P09084 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pax1P09084 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pax1P09084 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.03□□□□□ -0.16
Pax1P09084 Trmt13-210ENSMUST00000198454 880 ntBASIC14.03□□□□□ -0.16
Pax1P09084 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.03□□□□□ -0.16
Pax1P09084 Gm7514-201ENSMUST00000209475 934 ntBASIC14.03□□□□□ -0.16
Pax1P09084 Gm18671-201ENSMUST00000214826 683 ntBASIC14.03□□□□□ -0.16
Pax1P09084 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pax1P09084 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pax1P09084 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pax1P09084 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pax1P09084 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pax1P09084 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pax1P09084 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pax1P09084 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pax1P09084 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pax1P09084 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.02□□□□□ -0.16
Pax1P09084 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.02□□□□□ -0.16
Pax1P09084 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pax1P09084 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pax1P09084 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.02□□□□□ -0.16
Pax1P09084 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pax1P09084 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pax1P09084 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pax1P09084 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.02□□□□□ -0.17
Pax1P09084 Gm11434-201ENSMUST00000122379 629 ntBASIC14.02□□□□□ -0.17
Pax1P09084 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pax1P09084 Gm42642-201ENSMUST00000200683 355 ntBASIC14.02□□□□□ -0.17
Pax1P09084 Gm43371-201ENSMUST00000202838 1031 ntBASIC14.02□□□□□ -0.17
Pax1P09084 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.02□□□□□ -0.17
Pax1P09084 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pax1P09084 Gm5874-201ENSMUST00000096101 508 ntBASIC14.02□□□□□ -0.17
Pax1P09084 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pax1P09084 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pax1P09084 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.02□□□□□ -0.17
Pax1P09084 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pax1P09084 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pax1P09084 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pax1P09084 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pax1P09084 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.01□□□□□ -0.17
Pax1P09084 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.01□□□□□ -0.17
Pax1P09084 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pax1P09084 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pax1P09084 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.01□□□□□ -0.17
Pax1P09084 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.01□□□□□ -0.17
Pax1P09084 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pax1P09084 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pax1P09084 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.01□□□□□ -0.17
Pax1P09084 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pax1P09084 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pax1P09084 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.01□□□□□ -0.17
Pax1P09084 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pax1P09084 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pax1P09084 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pax1P09084 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pax1P09084 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pax1P09084 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pax1P09084 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pax1P09084 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pax1P09084 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pax1P09084 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pax1P09084 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pax1P09084 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pax1P09084 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pax1P09084 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pax1P09084 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pax1P09084 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pax1P09084 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pax1P09084 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pax1P09084 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14□□□□□ -0.17
Pax1P09084 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pax1P09084 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14□□□□□ -0.17
Pax1P09084 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms