Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hbb-b1P02088 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hbb-b1P02088 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.27□□□□□ -0.44
Hbb-b1P02088 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hbb-b1P02088 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hbb-b1P02088 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hbb-b1P02088 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hbb-b1P02088 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Hbb-b1P02088 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hbb-b1P02088 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
Hbb-b1P02088 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Hbb-b1P02088 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Gm43759-201ENSMUST00000196925 1261 ntBASIC12.27□□□□□ -0.45
Hbb-b1P02088 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.27□□□□□ -0.45
Hbb-b1P02088 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hbb-b1P02088 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hbb-b1P02088 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hbb-b1P02088 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Gm5067-201ENSMUST00000170449 1009 ntBASIC12.24□□□□□ -0.45
Hbb-b1P02088 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hbb-b1P02088 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms