Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01734 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01734 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P01734 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.86■□□□□ 0.61
P01734 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
P01734 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01734 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01734 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
P01734 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01734 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
P01734 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.85■□□□□ 0.61
P01734 Gm7889-201ENSMUST00000185591 958 ntBASIC18.85■□□□□ 0.61
P01734 Gm37025-201ENSMUST00000195159 829 ntBASIC18.85■□□□□ 0.61
P01734 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
P01734 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.85■□□□□ 0.61
P01734 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01734 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01734 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01734 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
P01734 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
P01734 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
P01734 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01734 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
P01734 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01734 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
P01734 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01734 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01734 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01734 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.84■□□□□ 0.61
P01734 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01734 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01734 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.84■□□□□ 0.61
P01734 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01734 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01734 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01734 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01734 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
P01734 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.83■□□□□ 0.61
P01734 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
P01734 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
P01734 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P01734 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P01734 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P01734 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01734 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01734 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
P01734 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
P01734 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.83■□□□□ 0.6
P01734 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P01734 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P01734 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01734 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01734 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P01734 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01734 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01734 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01734 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.82■□□□□ 0.6
P01734 Gm9731-201ENSMUST00000209480 747 ntBASIC18.82■□□□□ 0.6
P01734 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.82■□□□□ 0.6
P01734 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01734 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01734 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01734 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01734 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01734 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01734 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
P01734 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
P01734 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Gm13836-201ENSMUST00000121159 501 ntBASIC18.81■□□□□ 0.6
P01734 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.81■□□□□ 0.6
P01734 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.81■□□□□ 0.6
P01734 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
P01734 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
P01734 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.81■□□□□ 0.6
P01734 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.81■□□□□ 0.6
P01734 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01734 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
P01734 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.8■□□□□ 0.6
P01734 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
P01734 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
P01734 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01734 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
P01734 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.8■□□□□ 0.6
P01734 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.8■□□□□ 0.6
P01734 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01734 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01734 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01734 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms