Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Becn1O88597 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.84■□□□□ 0.77
Becn1O88597 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Becn1O88597 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.84■□□□□ 0.77
Becn1O88597 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Becn1O88597 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Becn1O88597 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Becn1O88597 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Becn1O88597 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Becn1O88597 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Becn1O88597 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Becn1O88597 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Becn1O88597 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Becn1O88597 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Becn1O88597 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Becn1O88597 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Becn1O88597 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
Becn1O88597 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.76
Becn1O88597 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Becn1O88597 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Becn1O88597 Reep4-203ENSMUST00000226563 1444 ntBASIC19.83■□□□□ 0.76
Becn1O88597 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Becn1O88597 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Becn1O88597 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Becn1O88597 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Becn1O88597 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Becn1O88597 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.82■□□□□ 0.76
Becn1O88597 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Becn1O88597 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Becn1O88597 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Becn1O88597 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Becn1O88597 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Becn1O88597 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.82■□□□□ 0.76
Becn1O88597 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Becn1O88597 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.82■□□□□ 0.76
Becn1O88597 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Becn1O88597 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Becn1O88597 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Becn1O88597 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Becn1O88597 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.81■□□□□ 0.76
Becn1O88597 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Becn1O88597 Gm13216-201ENSMUST00000117145 591 ntBASIC19.81■□□□□ 0.76
Becn1O88597 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.81■□□□□ 0.76
Becn1O88597 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.81■□□□□ 0.76
Becn1O88597 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Becn1O88597 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Becn1O88597 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Becn1O88597 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Becn1O88597 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Becn1O88597 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Becn1O88597 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Becn1O88597 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Becn1O88597 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Becn1O88597 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Becn1O88597 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Becn1O88597 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Becn1O88597 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Becn1O88597 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.8■□□□□ 0.76
Becn1O88597 Gm18671-201ENSMUST00000214826 683 ntBASIC19.8■□□□□ 0.76
Becn1O88597 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Becn1O88597 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Becn1O88597 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Becn1O88597 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Becn1O88597 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Becn1O88597 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Becn1O88597 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.8■□□□□ 0.76
Becn1O88597 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Becn1O88597 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Becn1O88597 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.8■□□□□ 0.76
Becn1O88597 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Becn1O88597 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Becn1O88597 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Becn1O88597 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.79■□□□□ 0.76
Becn1O88597 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Becn1O88597 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Becn1O88597 Gm13234-201ENSMUST00000120010 747 ntBASIC19.79■□□□□ 0.76
Becn1O88597 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Becn1O88597 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Becn1O88597 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Becn1O88597 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Becn1O88597 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Becn1O88597 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Becn1O88597 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Becn1O88597 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Becn1O88597 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Becn1O88597 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Becn1O88597 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Becn1O88597 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.78■□□□□ 0.76
Becn1O88597 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
Becn1O88597 Gm10033-202ENSMUST00000211874 928 ntBASIC19.78■□□□□ 0.76
Becn1O88597 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Becn1O88597 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Becn1O88597 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.78■□□□□ 0.76
Becn1O88597 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Becn1O88597 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Becn1O88597 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Becn1O88597 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Becn1O88597 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Becn1O88597 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Becn1O88597 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms